RNAscape

Geometric mapping and interactive visualization of RNA structure

Getting Started

1. Ensure Python 3.9+ is installed and clone the repository
2. Run pip install -r requirements.txt
3. Get x3dna-dssr and update X3DNA_PATH in run_rnascape.py
4. Run run_rnascape.py <FILEPATH> <PREFIX> (ex:python run_rnascape.py 1ivs.cif 1ivs)
5. Edit run_rnascape.py to change base pair annotation, rotation, and other features
6. Default output is in ./output/processed_images/

Citation